gtsam  4.0.0
gtsam
gtsam::DiscreteFactorGraph Class Reference

Detailed Description

A Discrete Factor Graph is a factor graph where all factors are Discrete, i.e.

Factor == DiscreteFactor

+ Inheritance diagram for gtsam::DiscreteFactorGraph:

Public Member Functions

 DiscreteFactorGraph ()
 Default constructor.
 
template<typename ITERATOR >
 DiscreteFactorGraph (ITERATOR firstFactor, ITERATOR lastFactor)
 Construct from iterator over factors.
 
template<class CONTAINER >
 DiscreteFactorGraph (const CONTAINER &factors)
 Construct from container of factors (shared_ptr or plain objects)
 
template<class DERIVEDFACTOR >
 DiscreteFactorGraph (const FactorGraph< DERIVEDFACTOR > &graph)
 Implicit copy/downcast constructor to override explicit template container constructor.
 
template<class SOURCE >
void add (const DiscreteKey &j, SOURCE table)
 
template<class SOURCE >
void add (const DiscreteKey &j1, const DiscreteKey &j2, SOURCE table)
 
template<class SOURCE >
void add (const DiscreteKeys &keys, SOURCE table)
 add shared discreteFactor immediately from arguments
 
KeySet keys () const
 Return the set of variables involved in the factors (set union)
 
DecisionTreeFactor product () const
 return product of all factors as a single factor
 
double operator() (const DiscreteFactor::Values &values) const
 Evaluates the factor graph given values, returns the joint probability of the factor graph given specific instantiation of values.
 
void print (const std::string &s="DiscreteFactorGraph", const KeyFormatter &formatter=DefaultKeyFormatter) const
 print
 
DiscreteFactor::sharedValues optimize () const
 Solve the factor graph by performing variable elimination in COLAMD order using the dense elimination function specified in function, followed by back-substitution resulting from elimination. More...
 
Testable
bool equals (const This &fg, double tol=1e-9) const
 
- Public Member Functions inherited from gtsam::FactorGraph< DiscreteFactor >
void reserve (size_t size)
 Reserve space for the specified number of factors if you know in advance how many there will be (works like FastVector::reserve).
 
std::enable_if< std::is_base_of< FactorType, DERIVEDFACTOR >::value >::type push_back (boost::shared_ptr< DERIVEDFACTOR > factor)
 Add a factor directly using a shared_ptr.
 
void push_back (const sharedFactor &factor)
 Add a factor directly using a shared_ptr.
 
std::enable_if< std::is_base_of< FactorType, typename ITERATOR::value_type::element_type >::value >::type push_back (ITERATOR firstFactor, ITERATOR lastFactor)
 push back many factors with an iterator over shared_ptr (factors are not copied)
 
std::enable_if< std::is_base_of< FactorType, typename CONTAINER::value_type::element_type >::value >::type push_back (const CONTAINER &container)
 push back many factors as shared_ptr's in a container (factors are not copied)
 
std::enable_if< std::is_base_of< This, typename CLIQUE::FactorGraphType >::value >::type push_back (const BayesTree< CLIQUE > &bayesTree)
 push back a BayesTree as a collection of factors. More...
 
std::enable_if< std::is_base_of< FactorType, DERIVEDFACTOR >::value >::type push_back (const DERIVEDFACTOR &factor)
 Add a factor by value, will be copy-constructed (use push_back with a shared_ptr to avoid the copy). More...
 
std::enable_if< std::is_base_of< FactorType, typename ITERATOR::value_type >::value >::type push_back (ITERATOR firstFactor, ITERATOR lastFactor)
 push back many factors with an iterator over plain factors (factors are copied)
 
std::enable_if< std::is_base_of< FactorType, typename CONTAINER::value_type >::value >::type push_back (const CONTAINER &container)
 push back many factors as non-pointer objects in a container (factors are copied)
 
std::enable_if< std::is_base_of< FactorType, DERIVEDFACTOR >::value >::type emplace_shared (Args &&... args)
 Emplace a factor.
 
std::enable_if< std::is_base_of< FactorType, DERIVEDFACTOR >::value, boost::assign::list_inserter< RefCallPushBack< This > > >::type operator+= (boost::shared_ptr< DERIVEDFACTOR > factor)
 Add a factor directly using a shared_ptr.
 
boost::assign::list_inserter< CRefCallPushBack< This > > operator+= (const sharedFactor &factor)
 Add a factor directly using a shared_ptr.
 
boost::assign::list_inserter< CRefCallPushBack< This > > operator+= (const FACTOR_OR_CONTAINER &factorOrContainer)
 Add a factor or container of factors, including STL collections, BayesTrees, etc. More...
 
std::enable_if< std::is_base_of< FactorType, DERIVEDFACTOR >::value >::type add (boost::shared_ptr< DERIVEDFACTOR > factor)
 Add a factor directly using a shared_ptr.
 
void add (const sharedFactor &factor)
 Add a factor directly using a shared_ptr.
 
void add (const FACTOR_OR_CONTAINER &factorOrContainer)
 Add a factor or container of factors, including STL collections, BayesTrees, etc. More...
 
void print (const std::string &s="FactorGraph", const KeyFormatter &formatter=DefaultKeyFormatter) const
 print out graph
 
bool equals (const This &fg, double tol=1e-9) const
 Check equality. More...
 
size_t size () const
 return the number of factors (including any null factors set by remove() ). More...
 
bool empty () const
 Check if the graph is empty (null factors set by remove() will cause this to return false). More...
 
const sharedFactor at (size_t i) const
 Get a specific factor by index (this checks array bounds and may throw an exception, as opposed to operator[] which does not).
 
sharedFactorat (size_t i)
 Get a specific factor by index (this checks array bounds and may throw an exception, as opposed to operator[] which does not).
 
const sharedFactor operator[] (size_t i) const
 Get a specific factor by index (this does not check array bounds, as opposed to at() which does).
 
sharedFactoroperator[] (size_t i)
 Get a specific factor by index (this does not check array bounds, as opposed to at() which does).
 
const_iterator begin () const
 Iterator to beginning of factors. More...
 
const_iterator end () const
 Iterator to end of factors. More...
 
sharedFactor front () const
 Get the first factor.
 
sharedFactor back () const
 Get the last factor.
 
iterator begin ()
 non-const STL-style begin()
 
iterator end ()
 non-const STL-style end()
 
void resize (size_t size)
 Directly resize the number of factors in the graph. More...
 
void remove (size_t i)
 delete factor without re-arranging indexes by inserting a NULL pointer
 
void replace (size_t index, sharedFactor factor)
 replace a factor by index
 
iterator erase (iterator item)
 Erase factor and rearrange other factors to take up the empty space.
 
iterator erase (iterator first, iterator last)
 Erase factors and rearrange other factors to take up the empty space.
 
size_t nrFactors () const
 return the number of non-null factors
 
KeySet keys () const
 Potentially slow function to return all keys involved, sorted, as a set.
 
KeyVector keyVector () const
 Potentially slow function to return all keys involved, sorted, as a vector.
 
bool exists (size_t idx) const
 MATLAB interface utility: Checks whether a factor index idx exists in the graph and is a live pointer.
 
- Public Member Functions inherited from gtsam::EliminateableFactorGraph< DiscreteFactorGraph >
boost::shared_ptr< BayesNetTypeeliminateSequential (OptionalOrdering ordering=boost::none, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none, OptionalOrderingType orderingType=boost::none) const
 Do sequential elimination of all variables to produce a Bayes net. More...
 
boost::shared_ptr< BayesTreeTypeeliminateMultifrontal (OptionalOrdering ordering=boost::none, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none, OptionalOrderingType orderingType=boost::none) const
 Do multifrontal elimination of all variables to produce a Bayes tree. More...
 
std::pair< boost::shared_ptr< BayesNetType >, boost::shared_ptr< FactorGraphType > > eliminatePartialSequential (const Ordering &ordering, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Do sequential elimination of some variables, in ordering provided, to produce a Bayes net and a remaining factor graph. More...
 
std::pair< boost::shared_ptr< BayesNetType >, boost::shared_ptr< FactorGraphType > > eliminatePartialSequential (const KeyVector &variables, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Do sequential elimination of the given variables in an ordering computed by COLAMD to produce a Bayes net and a remaining factor graph. More...
 
std::pair< boost::shared_ptr< BayesTreeType >, boost::shared_ptr< FactorGraphType > > eliminatePartialMultifrontal (const Ordering &ordering, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Do multifrontal elimination of some variables, in ordering provided, to produce a Bayes tree and a remaining factor graph. More...
 
std::pair< boost::shared_ptr< BayesTreeType >, boost::shared_ptr< FactorGraphType > > eliminatePartialMultifrontal (const KeyVector &variables, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Do multifrontal elimination of the given variables in an ordering computed by COLAMD to produce a Bayes net and a remaining factor graph. More...
 
boost::shared_ptr< BayesNetTypemarginalMultifrontalBayesNet (boost::variant< const Ordering &, const KeyVector & > variables, OptionalOrdering marginalizedVariableOrdering=boost::none, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Compute the marginal of the requested variables and return the result as a Bayes net. More...
 
boost::shared_ptr< BayesTreeTypemarginalMultifrontalBayesTree (boost::variant< const Ordering &, const KeyVector & > variables, OptionalOrdering marginalizedVariableOrdering=boost::none, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Compute the marginal of the requested variables and return the result as a Bayes tree. More...
 
boost::shared_ptr< FactorGraphTypemarginal (const KeyVector &variables, const Eliminate &function=EliminationTraitsType::DefaultEliminate, OptionalVariableIndex variableIndex=boost::none) const
 Compute the marginal factor graph of the requested variables. More...
 

Public Types

typedef DiscreteFactorGraph This
 Typedef to this class.
 
typedef FactorGraph< DiscreteFactorBase
 Typedef to base factor graph type.
 
typedef EliminateableFactorGraph< ThisBaseEliminateable
 Typedef to base elimination class.
 
typedef boost::shared_ptr< Thisshared_ptr
 shared_ptr to this class
 
typedef KeyVector Indices
 A map from keys to values.
 
typedef Assignment< KeyValues
 
typedef boost::shared_ptr< ValuessharedValues
 
- Public Types inherited from gtsam::FactorGraph< DiscreteFactor >
typedef DiscreteFactor FactorType
 factor type
 
typedef boost::shared_ptr< DiscreteFactorsharedFactor
 Shared pointer to a factor.
 
typedef sharedFactor value_type
 
typedef FastVector< sharedFactor >::iterator iterator
 
typedef FastVector< sharedFactor >::const_iterator const_iterator
 
- Public Types inherited from gtsam::EliminateableFactorGraph< DiscreteFactorGraph >
typedef EliminationTraits< FactorGraphTypeEliminationTraitsType
 Typedef to the specific EliminationTraits for this graph.
 
typedef EliminationTraitsType::ConditionalType ConditionalType
 Conditional type stored in the Bayes net produced by elimination.
 
typedef EliminationTraitsType::BayesNetType BayesNetType
 Bayes net type produced by sequential elimination.
 
typedef EliminationTraitsType::EliminationTreeType EliminationTreeType
 Elimination tree type that can do sequential elimination of this graph.
 
typedef EliminationTraitsType::BayesTreeType BayesTreeType
 Bayes tree type produced by multifrontal elimination.
 
typedef EliminationTraitsType::JunctionTreeType JunctionTreeType
 Junction tree type that can do multifrontal elimination of this graph.
 
typedef std::pair< boost::shared_ptr< ConditionalType >, boost::shared_ptr< _FactorType > > EliminationResult
 The pair of conditional and remaining factor produced by a single dense elimination step on a subgraph. More...
 
typedef boost::function< EliminationResult(const FactorGraphType &, const Ordering &)> Eliminate
 The function type that does a single dense elimination step on a subgraph.
 
typedef boost::optional< const Ordering & > OptionalOrdering
 Typedef for an optional ordering as an argument to elimination functions.
 
typedef boost::optional< const VariableIndex & > OptionalVariableIndex
 Typedef for an optional variable index as an argument to elimination functions.
 
typedef boost::optional< Ordering::OrderingTypeOptionalOrderingType
 Typedef for an optional ordering type.
 

Additional Inherited Members

- Protected Member Functions inherited from gtsam::FactorGraph< DiscreteFactor >
 FactorGraph ()
 Default constructor.
 
 FactorGraph (ITERATOR firstFactor, ITERATOR lastFactor)
 Constructor from iterator over factors (shared_ptr or plain objects)
 
 FactorGraph (const CONTAINER &factors)
 Construct from container of factors (shared_ptr or plain objects)
 
- Protected Attributes inherited from gtsam::FactorGraph< DiscreteFactor >
FastVector< sharedFactorfactors_
 concept check, makes sure FACTOR defines print and equals More...
 

Member Function Documentation

◆ optimize()

DiscreteFactor::sharedValues gtsam::DiscreteFactorGraph::optimize ( ) const

Solve the factor graph by performing variable elimination in COLAMD order using the dense elimination function specified in function, followed by back-substitution resulting from elimination.

Is equivalent to calling graph.eliminateSequential()->optimize().


The documentation for this class was generated from the following files: