gtsam 4.1.1
gtsam
ISAM2Clique.h
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1/* ----------------------------------------------------------------------------
2
3 * GTSAM Copyright 2010, Georgia Tech Research Corporation,
4 * Atlanta, Georgia 30332-0415
5 * All Rights Reserved
6 * Authors: Frank Dellaert, et al. (see THANKS for the full author list)
7
8 * See LICENSE for the license information
9
10 * -------------------------------------------------------------------------- */
11
18// \callgraph
19
20#pragma once
21
23#include <gtsam/inference/Key.h>
27#include <string>
28
29namespace gtsam {
30
36class GTSAM_EXPORT ISAM2Clique
37 : public BayesTreeCliqueBase<ISAM2Clique, GaussianFactorGraph> {
38 public:
39 typedef ISAM2Clique This;
41 typedef boost::shared_ptr<This> shared_ptr;
42 typedef boost::weak_ptr<This> weak_ptr;
44 typedef ConditionalType::shared_ptr sharedConditional;
45
46 Base::FactorType::shared_ptr cachedFactor_;
47 Vector gradientContribution_;
48#ifdef USE_BROKEN_FAST_BACKSUBSTITUTE
49 mutable FastMap<Key, VectorValues::iterator> solnPointers_;
50#endif
51
54 virtual ~ISAM2Clique() = default;
55
59 : Base(other),
60 cachedFactor_(other.cachedFactor_),
61 gradientContribution_(other.gradientContribution_) {}
62
66 Base::operator=(other);
67 cachedFactor_ = other.cachedFactor_;
68 gradientContribution_ = other.gradientContribution_;
69 return *this;
70 }
71
73 void setEliminationResult(
74 const FactorGraphType::EliminationResult& eliminationResult);
75
77 Base::FactorType::shared_ptr& cachedFactor() { return cachedFactor_; }
78
80 const Vector& gradientContribution() const { return gradientContribution_; }
81
83 void addGradientAtZero(VectorValues* g) const;
84
85 bool equals(const This& other, double tol = 1e-9) const;
86
88 void print(const std::string& s = "",
89 const KeyFormatter& formatter = DefaultKeyFormatter) const override;
90
91 void optimizeWildfire(const KeySet& replaced, double threshold,
92 KeySet* changed, VectorValues* delta,
93 size_t* count) const;
94
95 bool optimizeWildfireNode(const KeySet& replaced, double threshold,
96 KeySet* changed, VectorValues* delta,
97 size_t* count) const;
98
103 void nnz_internal(size_t* result) const;
104 size_t calculate_nnz() const;
105
121 void findAll(const KeySet& markedMask, KeySet* keys) const;
122
123 private:
128 bool isDirty(const KeySet& replaced, const KeySet& changed) const;
129
134 void fastBackSubstitute(VectorValues* delta) const;
135
136 /*
137 * Check whether the values changed above a threshold, or always true if the
138 * clique was replaced.
139 */
140 bool valuesChanged(const KeySet& replaced, const Vector& originalValues,
141 const VectorValues& delta, double threshold) const;
142
144 void markFrontalsAsChanged(KeySet* changed) const;
145
147 void restoreFromOriginals(const Vector& originalValues,
148 VectorValues* delta) const;
149
151 friend class boost::serialization::access;
152 template <class ARCHIVE>
153 void serialize(ARCHIVE& ar, const unsigned int /*version*/) {
154 ar& BOOST_SERIALIZATION_BASE_OBJECT_NVP(Base);
155 ar& BOOST_SERIALIZATION_NVP(cachedFactor_);
156 ar& BOOST_SERIALIZATION_NVP(gradientContribution_);
157 }
158}; // \struct ISAM2Clique
159
171size_t optimizeWildfire(const ISAM2Clique::shared_ptr& root, double threshold,
172 const KeySet& replaced, VectorValues* delta);
173
174size_t optimizeWildfireNonRecursive(const ISAM2Clique::shared_ptr& root,
175 double threshold, const KeySet& replaced,
176 VectorValues* delta);
177
178} // namespace gtsam
Base class for cliques of a BayesTree.
Conditional Gaussian Base class.
Chordal Bayes Net, the result of eliminating a factor graph.
Linear Factor Graph where all factors are Gaussians.
Global functions in a separate testing namespace.
Definition: chartTesting.h:28
size_t optimizeWildfire(const ISAM2Clique::shared_ptr &root, double threshold, const KeySet &keys, VectorValues *delta)
Optimize the BayesTree, starting from the root.
Definition: ISAM2Clique.cpp:226
std::string serialize(const T &input)
serializes to a string
Definition: serialization.h:112
void print(const Matrix &A, const string &s, ostream &stream)
print without optional string, must specify cout yourself
Definition: Matrix.cpp:155
std::function< std::string(Key)> KeyFormatter
Typedef for a function to format a key, i.e. to convert it to a string.
Definition: Key.h:35
Definition: FastMap.h:38
Template to create a binary predicate.
Definition: Testable.h:111
This is the base class for BayesTree cliques.
Definition: BayesTreeCliqueBase.h:50
A conditional Gaussian functions as the node in a Bayes network It has a set of parents y,...
Definition: GaussianConditional.h:39
boost::shared_ptr< This > shared_ptr
shared_ptr to this class
Definition: GaussianConditional.h:42
This class represents a collection of vector-valued variables associated each with a unique integer i...
Definition: VectorValues.h:74
Specialized Clique structure for ISAM2, incorporating caching and gradient contribution TODO: more do...
Definition: ISAM2Clique.h:37
const Vector & gradientContribution() const
Access the gradient contribution.
Definition: ISAM2Clique.h:80
ISAM2Clique(const ISAM2Clique &other)
Copy constructor, does not copy solution pointers as these are invalid in different trees.
Definition: ISAM2Clique.h:58
ISAM2Clique & operator=(const ISAM2Clique &other)
Assignment operator, does not copy solution pointers as these are invalid in different trees.
Definition: ISAM2Clique.h:65
Base::FactorType::shared_ptr & cachedFactor()
Access the cached factor.
Definition: ISAM2Clique.h:77
ISAM2Clique()
Default constructor.
Definition: ISAM2Clique.h:53